miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|160550302|gb|EY323397.1|EY323397 ATTAGATATATTAATTAAGAATGAAAAAAAAACATACAAAAAAACGATCAGCAAATGATATATGGTGTATCAACGAATTC
ATAGACACGTTAGTTACATTATTTTATTATTATAACATATTATCATATTATTATAAATTTATGGTTACATTTTATGAATT
TATAACCTATAATTATTATTGTGTAGGTAAACTGAGTTAATTAAGTTGATTATTCATATTATACGTTATAATTTAAGACG
GAATATTATGATTTCGCATTTGTGTTATTTGGTCACCCGCCAACGATTCTTCTAGCGGCTGCTCCCGGAAGTGCGTAAAA
GAAGAGGAAGAGGAAGAGACCGATGAAGAAGACGACGAGAATGGTGATGAAGTACCACTTGAATTTTTTCCAGATGATAA
ATTTGAATGCCTTCCAGGGCGATGTAAACCAGAAAAATGATGTCTCTGGACGTTTTGGTGGATCAAGGAATGGGAACTGA
TTGGGATCTTCTCTGGCCTTTCCAACTGGTTTCTGTTCGATGTCTCCTCCACATACTAGCTCCAACTCCATCTCTACTTT
ACCCGTCAGGTCAGCCTGACCAGACTCATCGCTAAAGCACGGCCAGAACCCTTTCACCCTCTTGTTCTCAAACAGCGAGA
TCAGCTTGACGGGATTGCCCGATTTGTGGAACTGTGGTAGCTGCTCCAGTGTGCACTTGCTGGAAGATTT




Most similar to sp|Q69ZN7|MYOF_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q69ZN7|MYOF_MOUSE Myoferlin OS=Mus musculus GN=Myof PE=1 SV=2
          Length = 2048

 Score =  106 bits (264), Expect = 2e-22
 Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
 Frame = -1

Query: 710  KSSSKCTLEQLPQFHKSGNPVKL--ISLFENKRVKGFWPCFSDESGQADLTGKVEMELEL 537
            K+S KC+L+ +P   K+ +P+K    SLFE + +KG+WPC++D+ G   + GKVEM LE+
Sbjct: 1901 KTSEKCSLDMIPDL-KAMDPLKAKTASLFEQRSMKGWWPCYADKDGTRVMAGKVEMTLEV 1959

Query: 536  VCGGDIEQKPVGKAREDPNQFPFLDPPKRPETSFFWFTSP 417
            +   + +++P GK R +PN  P LDPP RPETSF WFT+P
Sbjct: 1960 LNEREADERPAGKGRSEPNMNPKLDPPNRPETSFLWFTNP 1999